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  5. Sacu_v1.1_s0127.g021797

Sacu_v1.1_s0127.g021797


Description : Trihelix-type transcription factor & original description: CDS=1-1197


Gene families : OG0001565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001565_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0127.g021797
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Als_g23009 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0128.g048751 No alias not classified & original description: CDS=1-732 0.03 OrthoFinder output from all 47 species
Cba_g20818 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35610 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37025 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37659 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24237 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06084 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_68801g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0042274 ribosomal small subunit biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 28 116
No external refs found!