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  5. Sacu_v1.1_s0124.g021611

Sacu_v1.1_s0124.g021611 (YSL6)


Aliases : YSL6

Description : ferric cation-chelator transporter *(YSL) & original description: CDS=10-2250


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0124.g021611

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene03886.t1 YSL6, Aspi01Gene03886 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Mp4g10660.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Sam_g16876 No alias iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18011 No alias ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g19703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30797 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP HCCA
BP GO:0009245 lipid A biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046493 lipid A metabolic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901269 lipooligosaccharide metabolic process IEP HCCA
BP GO:1901271 lipooligosaccharide biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 471 512
IPR002885 Pentatricopeptide_repeat 377 405
IPR002885 Pentatricopeptide_repeat 518 564
IPR002885 Pentatricopeptide_repeat 307 355
IPR002885 Pentatricopeptide_repeat 237 286
IPR002885 Pentatricopeptide_repeat 412 460
IPR002885 Pentatricopeptide_repeat 36 59
IPR002885 Pentatricopeptide_repeat 205 235
IPR002885 Pentatricopeptide_repeat 70 94
IPR002885 Pentatricopeptide_repeat 101 130
IPR002885 Pentatricopeptide_repeat 175 199
IPR004813 OPT 98 722
No external refs found!