Solyc10g007550.3.1 (Solyc10g007550.3)


Aliases : Solyc10g007550.3

Description : 29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0001498 (Gene family) Phylogenetic Tree(s): OG0001498_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc10g007550.3.1
Cluster HCCA cluster: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT1G16280 AtRH36, SWA3, RH36 RNA helicase 36 0.13 Gene family
AT5G60990 No alias DEA(D/H)-box RNA helicase family protein 0.03 Gene family
Cpa|evm.model.tig00020848.20 No alias 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family
Cre12.g505200 No alias 29.2.2.3.5 protein.synthesis.ribosome... 0.04 Gene family
LOC_Os03g46610 Os03g0669000 29.2.2.3.5 protein.synthesis.ribosome... 0.04 Gene family
LOC_Os07g43980 Os07g0633500 29.2.2.3.5 protein.synthesis.ribosome... 0.02 Gene family
Zm00001d014787 GRMZM2G075027 29.2.2.3.5 protein.synthesis.ribosome... 0.15 Gene family
Zm00001d022246 GRMZM2G099253 29.2.2.3.5 protein.synthesis.ribosome... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 34 200
IPR001650 Helicase_C 237 343
No external refs found!