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  5. Sacu_v1.1_s0124.g021595

Sacu_v1.1_s0124.g021595


Description : not classified & original description: CDS=573-1916


Gene families : OG0007577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007577_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0124.g021595
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g010842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!