- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: CDS=1-2022
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00217860 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00166520 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00071p00184210 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g002042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003785 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003802 | SLO1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004449 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005647 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g049921 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069023 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g080993 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101230 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g32974 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16335 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35870 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07448 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g51296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27844 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28217 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17248 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000999 | No alias | not classified & original description: CDS=128-2962 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0050.g031009 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2424 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0074.g037414 | No alias | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1395.g102559 | No alias | not classified & original description: CDS=1-912 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s3922.g117339 | No alias | not classified & original description: CDS=1-831 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G035800.1 | Ceric.05G035800 | not classified & original description: pacid=50577834... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.19G076100.1 | Ceric.19G076100 | not classified & original description: pacid=50575482... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.28G037300.1 | Ceric.28G037300 | not classified & original description: pacid=50570602... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G046500.1 | Ceric.39G046500 | not classified & original description: pacid=50582543... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g06828 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36588 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g40967 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46471 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14704 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029254001 | OSB4 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g18200 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44148 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g44791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05637 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g35084 | OTP85 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13610 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22930 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28224 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34215 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g34483 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34542 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g46088 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05303 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63456 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63632 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g06218 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g06423 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13764 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14540 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14863 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16066 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18667 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g44697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006869 | lipid transport | IEP | HCCA |
| BP | GO:0015850 | organic hydroxy compound transport | IEP | HCCA |
| BP | GO:0015918 | sterol transport | IEP | HCCA |
| BP | GO:0032365 | intracellular lipid transport | IEP | HCCA |
| BP | GO:0032366 | intracellular sterol transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 272 | 292 |
| IPR002885 | Pentatricopeptide_repeat | 300 | 327 |
| IPR002885 | Pentatricopeptide_repeat | 403 | 427 |
| IPR002885 | Pentatricopeptide_repeat | 112 | 140 |
| IPR002885 | Pentatricopeptide_repeat | 491 | 512 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 196 | 243 |
| No external refs found! |