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  5. Sacu_v1.1_s0123.g021521

Sacu_v1.1_s0123.g021521


Description : not classified & original description: CDS=1-1152


Gene families : OG0000151 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0123.g021521
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene23604.t1 Aspi01Gene23604 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G007800.1 Ceric.18G007800 not classified & original description: pacid=50621578... 0.03 OrthoFinder output from all 47 species
Ceric.32G046300.1 Ceric.32G046300 not classified & original description: pacid=50598399... 0.02 OrthoFinder output from all 47 species
Pir_g60999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016390 No alias not classified & original description: CDS=1-1086 0.04 OrthoFinder output from all 47 species
Spa_g04043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!