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  5. Sacu_v1.1_s0123.g021507

Sacu_v1.1_s0123.g021507 (RAN1, HMA7)


Aliases : RAN1, HMA7

Description : not classified & original description: CDS=1-858


Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0123.g021507
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Adi_g075859 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Als_g02611 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70950.t1 HMA5, Aspi01Gene70950 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ceric.15G058100.1 HMA5, Ceric.15G058100 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ceric.34G045000.1 HMA5, Ceric.34G045000 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Dde_g48896 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ehy_g29726 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Gb_22148 HMA5 P1B-type heavy metal cation-transporting ATPase (HMA) 0.04 OrthoFinder output from all 47 species
Solyc08g080870.3.1 HMA5, Solyc08g080870 P1B-type heavy metal cation-transporting ATPase (HMA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!