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  5. Sacu_v1.1_s0122.g021470

Sacu_v1.1_s0122.g021470


Description : not classified & original description: CDS=252-1109


Gene families : OG0001883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001883_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0122.g021470
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Ceric.04G095800.1 Ceric.04G095800 not classified & original description: pacid=50632439... 0.03 OrthoFinder output from all 47 species
Dcu_g35677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g16670.1 LOC_Os03g16670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g49440.1 LOC_Os03g49440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g13591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_865197g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g13046 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g63716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g068630.3.1 Solyc01g068630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g41025 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g50407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009264 deoxyribonucleotide catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041492 HAD_2 32 221
No external refs found!