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  5. Sacu_v1.1_s0121.g021422

Sacu_v1.1_s0121.g021422 (MCM9)


Aliases : MCM9

Description : component *(MCM9) of MCM8-9 cell cycle auxiliary complex & original description: CDS=62-2392


Gene families : OG0001056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0121.g021422
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00030490 MCM7, PRL,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 OrthoFinder output from all 47 species
Ala_g04203 MCM9 component *(MCM9) of MCM8-9 cell cycle auxiliary complex... 0.03 OrthoFinder output from all 47 species
Als_g07824 MCM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11754 MCM4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23244 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Cre07.g316850 MCM4 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.01 OrthoFinder output from all 47 species
Cre10.g455850 MCM7, PRL Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.02 OrthoFinder output from all 47 species
Len_g11914 MCM7, PRL component *(MCM7) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Lfl_g19272 MCM4 component *(MCM4) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Sam_g09734 No alias component *(MCM7) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Solyc01g105530.3.1 MCM9, Solyc01g105530 Probable DNA helicase MCM9 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e030823_P001 MCM9, Zm00001e030823 component MCM9 of MCM8-9 cell cycle auxiliary complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0032508 DNA duplex unwinding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR033762 MCM_OB 130 258
IPR001208 MCM_dom 318 520
IPR041562 MCM_lid 568 621
No external refs found!