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  5. Sacu_v1.1_s0120.g021362

Sacu_v1.1_s0120.g021362


Description : not classified & original description: CDS=1-2106


Gene families : OG0001839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001839_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0120.g021362
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT5G05480 No alias Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
Ala_g21371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene17184.t1 Aspi01Gene17184 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21390.t1 Aspi01Gene21390 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0007.g010761 No alias not classified & original description: CDS=1-2121 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024882 No alias not classified & original description: CDS=1-1860 0.02 OrthoFinder output from all 47 species
Ceric.38G011800.1 Ceric.38G011800 not classified & original description: pacid=50579411... 0.07 OrthoFinder output from all 47 species
Dcu_g33121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g10950.1 LOC_Os01g10950 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11010.1 LOC_Os01g11010 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.05 OrthoFinder output from all 47 species
Lfl_g24144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g09340.1 No alias Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.05 OrthoFinder output from all 47 species
Nbi_g40078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g051020.2.1 Solyc06g051020 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
Solyc07g062460.4.1 Solyc07g062460 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
Solyc10g007330.1.1 Solyc10g007330 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
Solyc12g014270.3.1 Solyc12g014270 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.03 OrthoFinder output from all 47 species
Zm00001e012654_P001 Zm00001e012654 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.07 OrthoFinder output from all 47 species
Zm00001e026026_P001 Zm00001e026026 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.02 OrthoFinder output from all 47 species
Zm00001e031606_P001 Zm00001e031606 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008150 biological_process IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
InterPro domains Description Start Stop
IPR021102 PNGase_A 101 559
No external refs found!