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  5. Sacu_v1.1_s0120.g021360

Sacu_v1.1_s0120.g021360


Description : cellulose synthase CSC-interactive protein *(CSI) & original description: CDS=145-6888


Gene families : OG0001114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0120.g021360
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aev_g18895 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Als_g23027 CSI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23029 CSI1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63688 CSI1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g11491 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aob_g24612 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aop_g70913 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13132.t1 CSI1, Aspi01Gene13132 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ceric.34G069600.1 CSI1, Ceric.34G069600 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Dac_g10736 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Dcu_g49114 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ehy_g07970 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Ehy_g26551 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
LOC_Os06g11990.1 CSI1, LOC_Os06g11990 CSI-type cellulose synthase CSC-interactive protein 0.04 OrthoFinder output from all 47 species
Lfl_g18951 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
MA_10435637g0030 CSI1 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g43695 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Nbi_g16604 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Nbi_g18059 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Pir_g12256 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Pir_g27649 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Pnu_g27164 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Sam_g18051 No alias cellulose synthase CSC-interactive protein *(CSI) &... 0.07 OrthoFinder output from all 47 species
Smo78846 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Solyc04g054480.3.1 CSI1, Solyc04g054480 CSI-type cellulose synthase CSC-interactive protein 0.05 OrthoFinder output from all 47 species
Spa_g10503 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Spa_g26858 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.04 OrthoFinder output from all 47 species
Tin_g04197 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Zm00001e030842_P001 CSI1, Zm00001e030842 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e036124_P001 CSI1, Zm00001e036124 CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 838 868
IPR000008 C2_dom 2125 2214
No external refs found!