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  5. Sacu_v1.1_s0118.g021244

Sacu_v1.1_s0118.g021244


Description : not classified & original description: CDS=1-804


Gene families : OG0002335 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002335_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0118.g021244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00211180 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
LOC_Os06g47300.1 LOC_Os06g47300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g30425 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006094 gluconeogenesis IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019319 hexose biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046364 monosaccharide biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 99
No external refs found!