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  5. Sacu_v1.1_s0117.g021156

Sacu_v1.1_s0117.g021156


Description : not classified & original description: CDS=1221-3014


Gene families : OG0000367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0117.g021156
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259710 evm_27.TU.AmTr_v1... Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g14609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18546 No alias xylogalacturonan xylosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os06g43160.1 LOC_Os06g43160 Probable glycosyltransferase At5g03795 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g10778 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13258 No alias xylogalacturonan xylosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g22996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19376 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 271 547
No external refs found!