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  5. Sacu_v1.1_s0116.g021110

Sacu_v1.1_s0116.g021110


Description : not classified & original description: CDS=70-1113


Gene families : OG0000785 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000785_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0116.g021110
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00209930 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G67780 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 protein 0.05 OrthoFinder output from all 47 species
AT2G23530 No alias Zinc-finger domain of monoamine-oxidase A repressor R1 0.05 OrthoFinder output from all 47 species
Adi_g025810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26555 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.02 OrthoFinder output from all 47 species
Als_g03213 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.07 OrthoFinder output from all 47 species
Aop_g20889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Aop_g24005 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene25905.t1 Aspi01Gene25905 component *(DDR) of ISWI chromatin remodeling complex &... 0.06 OrthoFinder output from all 47 species
Azfi_s0013.g013198 No alias not classified & original description: CDS=1-1875 0.01 OrthoFinder output from all 47 species
Ceric.07G054500.1 Ceric.07G054500 not classified & original description: pacid=50627528... 0.07 OrthoFinder output from all 47 species
Ceric.22G043400.1 Ceric.22G043400 not classified & original description: pacid=50614394... 0.03 OrthoFinder output from all 47 species
Ceric.23G067000.1 Ceric.23G067000 component *(DDR) of ISWI chromatin remodeling complex &... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021582.33 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre12.g531350 No alias No description available 0.05 OrthoFinder output from all 47 species
Dac_g09060 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g33884 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.08 OrthoFinder output from all 47 species
Ehy_g19312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008246001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036441001 No alias No description available 0.08 OrthoFinder output from all 47 species
Gb_14005 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g09082 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g38243 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.05 OrthoFinder output from all 47 species
MA_109451g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g13607 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.09 OrthoFinder output from all 47 species
Nbi_g03121 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.09 OrthoFinder output from all 47 species
Ore_g19547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30889 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Sam_g06325 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.07 OrthoFinder output from all 47 species
Solyc02g063060.4.1 Solyc02g063060 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g090200.3.1 Solyc02g090200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g39832 No alias component *(DDR) of ISWI chromatin remodeling complex &... 0.03 OrthoFinder output from all 47 species
Spa_g49762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011227_P001 Zm00001e011227 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e022617_P002 Zm00001e022617 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 145 207
No external refs found!