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  5. Sacu_v1.1_s0116.g021064

Sacu_v1.1_s0116.g021064 (RANBP1)


Aliases : RANBP1

Description : Ran-activation accessory protein *(RanBP1) & original description: CDS=93-776


Gene families : OG0001732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0116.g021064

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0009.g011820 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.09G056500.1 RANBP1, Ceric.09G056500 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G048500.1 Ceric.30G048500 Ran-activation accessory protein *(RanBP1) & original... 0.05 OrthoFinder output from all 47 species
Dac_g08112 RANBP1 Ran-activation accessory protein *(RanBP1) & original... 0.03 OrthoFinder output from all 47 species
Smo165360 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000156 Ran_bind_dom 45 176
IPR012438 DUF1639 281 316
No external refs found!