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  5. Sacu_v1.1_s0115.g020972

Sacu_v1.1_s0115.g020972


Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex & original description: CDS=211-633


Gene families : OG0005545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0115.g020972

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01015195001 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo175548 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g00866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 74 125
No external refs found!