1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0113.g020858

Sacu_v1.1_s0113.g020858


Description : not classified & original description: CDS=78-2609


Gene families : OG0007311 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007311_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0113.g020858

Target Alias Description ECC score Gene Family Method Actions
Adi_g081369 ATX3, SDG14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02751.t1 Aspi01Gene02751 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009963 No alias not classified & original description: CDS=265-4647 0.03 OrthoFinder output from all 47 species
Ceric.36G054100.1 Ceric.36G054100 not classified & original description: pacid=50568426... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000826.13 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g09204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g33304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 683 732
IPR019542 Enhancer_polycomb-like_N 556 654
No external refs found!