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  5. Sacu_v1.1_s0112.g020762

Sacu_v1.1_s0112.g020762 (BOP1)


Aliases : BOP1

Description : not classified & original description: CDS=1-1593


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0112.g020762
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Als_g02401 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_06351 BOP1 no description available(sp|a0a072vim5|noot2_medtr : 169.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09800.1 NPR1, SAI1,... salicylic acid receptor protein (NPR1). NPR1 systemic... 0.02 OrthoFinder output from all 47 species
Zm00001e018649_P001 BOP2, Zm00001e018649 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species
Zm00001e028331_P001 BOP2, Zm00001e028331 transcriptional co-activator (BOP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 295 373
IPR000210 BTB/POZ_dom 34 77
No external refs found!