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  5. Sacu_v1.1_s0112.g020758

Sacu_v1.1_s0112.g020758


Description : not classified & original description: CDS=148-2271


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0112.g020758
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00134970 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00189870 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00190300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00180200 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00092p00040150 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00111p00120840 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G19090 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
AT3G60320 No alias Protein of unknown function (DUF630 and DUF632) 0.03 OrthoFinder output from all 47 species
AT4G39790 No alias Protein of unknown function (DUF630 and DUF632) 0.02 OrthoFinder output from all 47 species
Adi_g076957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06341 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38522.t1 Aspi01Gene38522 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.06 OrthoFinder output from all 47 species
Azfi_s0304.g063813 No alias not classified & original description: CDS=88-2331 0.03 OrthoFinder output from all 47 species
Azfi_s0385.g067523 No alias not classified & original description: CDS=1-2535 0.04 OrthoFinder output from all 47 species
Cba_g01214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G081800.1 Ceric.14G081800 not classified & original description: pacid=50634286... 0.03 OrthoFinder output from all 47 species
Ceric.17G022700.1 Ceric.17G022700 not classified & original description: pacid=50618371... 0.06 OrthoFinder output from all 47 species
Ceric.27G029900.1 Ceric.27G029900 not classified & original description: pacid=50605026... 0.05 OrthoFinder output from all 47 species
Dac_g02345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023992001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01035712001 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os05g16640.1 LOC_Os05g16640 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g11070.1 LOC_Os07g11070 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g19037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1869g0010 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13560 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44146 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08968 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43384 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021336 No alias not classified & original description: CDS=1-2424 0.04 OrthoFinder output from all 47 species
Sam_g16580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47613 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g51249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo425043 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g111740.3.1 Solyc01g111740 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g054880.3.1 Solyc04g054880 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003599_P001 Zm00001e003599 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e015309_P001 Zm00001e015309 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035963_P001 Zm00001e035963 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e035991_P001 Zm00001e035991 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR006867 DUF632 267 574
IPR006868 DUF630 1 58
No external refs found!