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  5. Sacu_v1.1_s0111.g020704

Sacu_v1.1_s0111.g020704


Description : not classified & original description: CDS=1-3852


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0111.g020704

Target Alias Description ECC score Gene Family Method Actions
AT3G27860 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g04183 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12554 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025624001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8546g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05139 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.03 OrthoFinder output from all 47 species
Pir_g25442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g086750.3.1 Solyc02g086750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g11186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 250 331
No external refs found!