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  5. Sacu_v1.1_s0111.g020683

Sacu_v1.1_s0111.g020683


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: CDS=1-3129


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0111.g020683
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00183470 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT3G14170 No alias Plant protein of unknown function (DUF936) 0.03 OrthoFinder output from all 47 species
AT4G13370 No alias Plant protein of unknown function (DUF936) 0.1 OrthoFinder output from all 47 species
Ala_g32630 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Aop_g11292 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Aspi01Gene00569.t1 Aspi01Gene00569 regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Ceric.02G008100.1 Ceric.02G008100 regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Ceric.11G037300.1 Ceric.11G037300 regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Dcu_g07734 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
GSVIVT01015437001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01016707001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_38624 No alias regulatory protein (CORD) of cortical microtubule organisation 0.06 OrthoFinder output from all 47 species
LOC_Os11g02740.1 LOC_Os11g02740 regulatory protein (CORD) of cortical microtubule organisation 0.07 OrthoFinder output from all 47 species
LOC_Os12g02710.1 LOC_Os12g02710 regulatory protein (CORD) of cortical microtubule organisation 0.1 OrthoFinder output from all 47 species
Len_g03904 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Lfl_g39733 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.05 OrthoFinder output from all 47 species
Msp_g14571 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Msp_g15670 No alias regulatory protein *(CORD) of cortical microtubule... 0.1 OrthoFinder output from all 47 species
Nbi_g10387 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Ppi_g12415 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Solyc03g122080.3.1 Solyc03g122080 regulatory protein (CORD) of cortical microtubule organisation 0.05 OrthoFinder output from all 47 species
Solyc12g007020.2.1 Solyc12g007020 regulatory protein (CORD) of cortical microtubule organisation 0.06 OrthoFinder output from all 47 species
Spa_g12628 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Spa_g44766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47771 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Tin_g08819 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Tin_g44365 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Zm00001e024007_P001 Zm00001e024007 regulatory protein (CORD) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Zm00001e028526_P001 Zm00001e028526 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 415 686
IPR010341 DUF936_pln 4 419
IPR010341 DUF936_pln 715 1037
No external refs found!