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  5. Sacu_v1.1_s0110.g020651

Sacu_v1.1_s0110.g020651 (CPN60B, LEN1)


Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: CDS=93-1937


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0110.g020651

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00185880 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00119930 CPN60B, LEN1,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000356 No alias chaperone *(Hsp60) & original description: CDS=314-2140 0.04 OrthoFinder output from all 47 species
Azfi_s0029.g024060 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=155-2068 0.04 OrthoFinder output from all 47 species
Ceric.03G036700.1 CH-CPN60A,... chaperone *(Hsp60) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.21G040000.1 Ceric.21G040000 chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre17.g741450 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Ehy_g08451 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13340 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28966 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.05 OrthoFinder output from all 47 species
Mp5g20470.1 CH-CPN60A, CPN60A, SLP subunit alpha of Cpn60 chaperonin complex. component... 0.05 OrthoFinder output from all 47 species
Sam_g12248 No alias chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e029825_P001 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e031536_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 88 591
No external refs found!