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  5. Sacu_v1.1_s0109.g020516

Sacu_v1.1_s0109.g020516 (ELF6)


Aliases : ELF6

Description : histone demethylase *(PKDM9) & original description: CDS=1-5949


Gene families : OG0004407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004407_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0109.g020516
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00181100 REF6,... RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 OrthoFinder output from all 47 species
Aspi01Gene32477.t1 REF6, Aspi01Gene32477 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45127.t1 REF6, Aspi01Gene45127 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063842 ELF6 histone demethylase *(PKDM9) & original description: CDS=1-5166 0.02 OrthoFinder output from all 47 species
LOC_Os12g18150.1 REF6, LOC_Os12g18150 histone demethylase (PKDM9). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
Msp_g25734 ELF6 histone demethylase *(PKDM9) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g02511 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18890 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04198 ELF6 histone demethylase *(PKDM9) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004860 protein kinase inhibitor activity IEP HCCA
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019210 kinase inhibitor activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 402 521
IPR013087 Znf_C2H2_type 1954 1980
IPR003349 JmjN 80 113
No external refs found!