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  5. Sacu_v1.1_s0109.g020515

Sacu_v1.1_s0109.g020515 (ATGCN5, GCN5)


Aliases : ATGCN5, GCN5

Description : not classified & original description: CDS=75-2189


Gene families : OG0003045 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003045_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0109.g020515
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Adi_g057121 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12591 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04195 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16234 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38272 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g095200 ATGCN4, GCN4 ABC transporter F family member 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g28626 ATGCN5, GCN5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g07651 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01082 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_01083 ATGCN5, GCN5 ABC transporter F family member 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os11g39020.1 ATGCN5, GCN5,... ABC transporter F family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g13114 ATGCN5, GCN5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07903 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14610 ATGCN5, GCN5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30372 ATGCN5, GCN5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0005986 sucrose biosynthetic process IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0050307 sucrose-phosphate phosphatase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR032781 ABC_tran_Xtn 339 426
IPR003439 ABC_transporter-like_ATP-bd 454 584
IPR003439 ABC_transporter-like_ATP-bd 125 300
No external refs found!