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  5. Sacu_v1.1_s0109.g020508

Sacu_v1.1_s0109.g020508


Description : GRAS-type transcription factor & original description: CDS=1-399


Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0109.g020508

Target Alias Description ECC score Gene Family Method Actions
Adi_g115872 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03358 No alias GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13650 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29384 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66379.t1 ATGRAS2, SCL14,... GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0304.g063850 No alias GRAS-type transcription factor & original description: CDS=1-2073 0.06 OrthoFinder output from all 47 species
Dac_g14499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42116 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g42970 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09269 No alias GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34112 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16289 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31430 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29764 No alias transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os03g40080.1 LOC_Os03g40080 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
LOC_Os11g47890.1 LOC_Os11g47890 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Ppi_g06327 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009546 No alias GRAS-type transcription factor & original description: CDS=1-2640 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020509 No alias GRAS-type transcription factor & original description: CDS=1-1197 0.05 OrthoFinder output from all 47 species
Sam_g03971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo74605 ATGRAS2, SCL14, GRAS2 RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc05g053090.2.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Solyc06g082530.3.1 ATGRAS2, SCL14,... transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Spa_g16511 ATGRAS2, SCL14, GRAS2 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53582 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23007 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020938_P001 Zm00001e020938 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA

No InterPro domains available for this sequence

No external refs found!