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  5. Sacu_v1.1_s0109.g020494

Sacu_v1.1_s0109.g020494


Description : TOR-dependent regulatory protein *(MRF) of protein translation & original description: CDS=1-2172


Gene families : OG0002034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0109.g020494

Target Alias Description ECC score Gene Family Method Actions
Adi_g087900 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Als_g20655 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Als_g22797 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.02 OrthoFinder output from all 47 species
Pir_g13561 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species
Tin_g04689 No alias TOR-dependent regulatory protein *(MRF) of protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 132 242
IPR003891 Initiation_fac_eIF4g_MI 296 399
IPR003891 Initiation_fac_eIF4g_MI 599 706
IPR003891 Initiation_fac_eIF4g_MI 435 545
No external refs found!