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  5. Sacu_v1.1_s0107.g020372

Sacu_v1.1_s0107.g020372 (ATRPA70A, RPA1A,...)


Aliases : ATRPA70A, RPA1A, ATRPA1A, RPA70A

Description : component *(RPA1) of RPA presynaptic filament assembly factor complex & original description: CDS=1-2517


Gene families : OG0002229 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002229_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0107.g020372

Target Alias Description ECC score Gene Family Method Actions
Aop_g19018 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.04 OrthoFinder output from all 47 species
Aspi01Gene23730.t1 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.02 OrthoFinder output from all 47 species
Ceric.07G018700.1 ATRPA70A, RPA1A,... component *(RPA1) of RPA presynaptic filament assembly... 0.03 OrthoFinder output from all 47 species
Zm00001e029651_P001 Zm00001e029651 component RPA1 of single-stranded-DNA binding RPA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP HCCA
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 262 347
IPR001878 Znf_CCHC 797 813
IPR031657 REPA_OB_2 372 476
IPR007199 Rep_factor-A_N 7 102
IPR013955 Rep_factor-A_C 533 682
No external refs found!