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  5. Sacu_v1.1_s0105.g020195

Sacu_v1.1_s0105.g020195


Description : group-II intron splicing RNA helicase *(ISE2) & original description: CDS=1-4863


Gene families : OG0006537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0105.g020195
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Als_g14708 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.02 OrthoFinder output from all 47 species
Aop_g26389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27041 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene50149.t1 Aspi01Gene50149 group-II intron splicing RNA helicase *(ISE2) & original... 0.04 OrthoFinder output from all 47 species
Cba_g14041 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Cba_g67251 ISE2, PDE317, EMB25 group-II intron splicing RNA helicase *(ISE2) & original... 0.05 OrthoFinder output from all 47 species
Msp_g23027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20495 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species
Pir_g59610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17468 No alias group-II intron splicing RNA helicase *(ISE2) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR012961 Ski2/MTR4_C 1439 1549
IPR011545 DEAD/DEAH_box_helicase_dom 729 870
No external refs found!