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  5. Sacu_v1.1_s0104.g020121

Sacu_v1.1_s0104.g020121 (GAMMA CA1)


Aliases : GAMMA CA1

Description : component *(CAL) of NADH dehydrogenase carbonic anhydrase module & original description: CDS=202-999


Gene families : OG0002393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0104.g020121
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Ala_g10541 GAMMA CA2, APFI component *(CAL) of NADH dehydrogenase carbonic... 0.02 OrthoFinder output from all 47 species
Ceric.34G005500.1 GAMMA CA2, APFI,... component *(CAL) of NADH dehydrogenase carbonic... 0.03 OrthoFinder output from all 47 species
LOC_Os12g07220.1 GAMMA CA2, APFI,... carbonic anhydrase non-core component of NADH dehydrogenase 0.02 OrthoFinder output from all 47 species
Mp1g03720.1 GAMMA CA2, APFI carbonic anhydrase non-core component of NADH dehydrogenase 0.03 OrthoFinder output from all 47 species
Nbi_g17251 GAMMA CA2, APFI component *(CAL) of NADH dehydrogenase carbonic... 0.03 OrthoFinder output from all 47 species
Sam_g37151 No alias component *(CAL) of NADH dehydrogenase carbonic... 0.03 OrthoFinder output from all 47 species
Zm00001e017423_P001 GAMMA CA1, Zm00001e017423 carbonic anhydrase non-core component of NADH dehydrogenase 0.05 OrthoFinder output from all 47 species
Zm00001e035703_P001 GAMMA CA2, APFI,... carbonic anhydrase non-core component of NADH dehydrogenase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005747 mitochondrial respiratory chain complex I IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009555 pollen development IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030964 NADH dehydrogenase complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
CC GO:0045271 respiratory chain complex I IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001451 Hexapep 136 170
No external refs found!