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  5. Sacu_v1.1_s0104.g020111

Sacu_v1.1_s0104.g020111


Description : not classified & original description: CDS=1-3015


Gene families : OG0008907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008907_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0104.g020111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00171650 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G04235 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aspi01Gene71786.t1 Aspi01Gene71786 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07448 No alias scaffold protein *(KNL1) of kinetochore KNL1-Mis12-Ndc80... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003796 lysozyme activity IEP HCCA
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0061783 peptidoglycan muralytic activity IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!