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  5. Sacu_v1.1_s0104.g020101

Sacu_v1.1_s0104.g020101


Description : not classified & original description: CDS=1005-2906


Gene families : OG0001424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0104.g020101
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g056270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03593 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0011.g012562 No alias not classified & original description: CDS=122-2542 0.03 OrthoFinder output from all 47 species
Ceric.13G055800.1 Ceric.13G055800 not classified & original description: pacid=50636327... 0.03 OrthoFinder output from all 47 species
Ehy_g20800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029687001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g10404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g04810.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Smo446036 No alias No description available 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!