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  5. Sacu_v1.1_s0103.g020026

Sacu_v1.1_s0103.g020026


Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: CDS=87-551


Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0103.g020026

Target Alias Description ECC score Gene Family Method Actions
AT3G53890 No alias Ribosomal protein S21e 0.03 OrthoFinder output from all 47 species
Als_g29961 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016110 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s2932.g113764 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre03.g203450 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01017756001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Mp4g22150.1 No alias component RPS21 of SSU proteome 0.02 OrthoFinder output from all 47 species
Sam_g07802 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g07803 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g19976 No alias component *(eS21) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e031393_P002 Zm00001e031393 component RPS21 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001931 Ribosomal_S21e 91 149
No external refs found!