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  5. Sacu_v1.1_s0103.g020001

Sacu_v1.1_s0103.g020001


Description : not classified & original description: CDS=75-362


Gene families : OG0002741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0103.g020001

Target Alias Description ECC score Gene Family Method Actions
Ala_g01231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04986 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g08376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g15110.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g09417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g19194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48096 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g50697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g093550.3.1 Solyc02g093550 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!