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  5. Sacu_v1.1_s0103.g019987

Sacu_v1.1_s0103.g019987


Description : regulatory protein *(ELMO) involved in pectin-dependent cell adhesion & original description: CDS=269-880


Gene families : OG0000860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0103.g019987
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Adi_g011819 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Adi_g039482 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Aob_g26014 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g02738 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Aspi01Gene10255.t1 Aspi01Gene10255 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Cba_g58857 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ceric.05G021800.1 Ceric.05G021800 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.05G082200.1 Ceric.05G082200 regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dac_g06416 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g39066 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01003726001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g28995 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Lfl_g35834 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pir_g02140 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pnu_g12535 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g12866 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Smo141704 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc07g049730.3.1 Solyc07g049730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g05464 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g12955 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Zm00001e041170_P001 Zm00001e041170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010471 DUF1068 14 172
No external refs found!