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  5. Sacu_v1.1_s0103.g019962

Sacu_v1.1_s0103.g019962


Description : component *(uL11) of large ribosomal-subunit (LSU) proteome & original description: CDS=1-501


Gene families : OG0001473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001473_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0103.g019962

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016274001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Pir_g37022 No alias component *(uL11) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 47 species
Zm00001e007067_P001 Zm00001e007067 component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Zm00001e008316_P001 Zm00001e008316 component RPL12 of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR020784 Ribosomal_L11_N 15 69
IPR020783 Ribosomal_L11_C 75 144
No external refs found!