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  5. Sacu_v1.1_s0102.g019876

Sacu_v1.1_s0102.g019876 (RPS17, CS17, PRPS17)


Aliases : RPS17, CS17, PRPS17

Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: CDS=1-432


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0102.g019876

Target Alias Description ECC score Gene Family Method Actions
AT1G79850 RPS17, CS17, PRPS17 ribosomal protein S17 0.1 OrthoFinder output from all 47 species
Adi_g012725 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Als_g47206 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g43549 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.11G069100.1 Ceric.11G069100 component *(uS17c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cre02.g118950 emb1129 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Ehy_g07306 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Gb_07769 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Lfl_g10801 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
MA_10123473g0010 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Nbi_g24135 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Nbi_g38729 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pnu_g06274 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pp3c11_14630V3.1 RPS17, CS17,... ribosomal protein S17 0.02 OrthoFinder output from all 47 species
Pp3c1_12860V3.1 RPS17, CS17,... ribosomal protein S17 0.03 OrthoFinder output from all 47 species
Sam_g38683 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g47246 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g120630.4.1 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g09281 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e028738_P001 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 55 122
No external refs found!