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  5. Sacu_v1.1_s0102.g019875

Sacu_v1.1_s0102.g019875


Description : not classified & original description: CDS=731-4831


Gene families : OG0002278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0102.g019875
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Aev_g29620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15227 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007550 No alias not classified & original description: CDS=598-3672 0.04 OrthoFinder output from all 47 species
Azfi_s0548.g076435 No alias not classified & original description: CDS=704-5134 0.04 OrthoFinder output from all 47 species
Ceric.13G035700.1 Ceric.13G035700 not classified & original description: pacid=50636791... 0.04 OrthoFinder output from all 47 species
LOC_Os10g16640.1 LOC_Os10g16640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10437109g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g25739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!