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  5. Sacu_v1.1_s0101.g019820

Sacu_v1.1_s0101.g019820


Description : not classified & original description: CDS=1-657


Gene families : OG0005579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0101.g019820

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00193130 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G02475 No alias Polyketide cyclase/dehydrase and lipid transport... 0.03 OrthoFinder output from all 47 species
Adi_g004321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05143 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g13297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G032800.1 Ceric.06G032800 not classified & original description: pacid=50620611... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000949.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g43231 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01028194001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g22510.1 LOC_Os01g22510 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09247 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05206 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g068030.3.1 Solyc01g068030 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004134 4-alpha-glucanotransferase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005031 COQ10_START 77 204
No external refs found!