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  5. Sacu_v1.1_s0101.g019788

Sacu_v1.1_s0101.g019788


Description : storage vacuole protein sorting receptor *(RMR) & original description: CDS=83-1120


Gene families : OG0000625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000625_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0101.g019788
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0314.g064234 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species
Dac_g27818 No alias storage vacuole protein sorting receptor *(RMR) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01018761001 RMR1, ATRMR1 Vesicle trafficking.endomembrane trafficking.vacuolar... 0.01 OrthoFinder output from all 47 species
Spa_g48956 No alias storage vacuole protein sorting receptor *(RMR) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR003137 PA_domain 87 164
IPR001841 Znf_RING 254 281
No external refs found!