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  5. Sacu_v1.1_s0101.g019782

Sacu_v1.1_s0101.g019782 (GAE1)


Aliases : GAE1

Description : UDP-D-glucuronic acid 4-epimerase & original description: CDS=749-2164


Gene families : OG0000504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000504_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0101.g019782
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Adi_g116343 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene69141.t1 GAE1, Aspi01Gene69141 UDP-D-glucuronic acid 4-epimerase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11175 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g20173 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07655 GAE1 UDP-D-glucuronic acid 4-epimerase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018554001 GAE2 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
LOC_Os03g14540.1 GAE2, LOC_Os03g14540 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species
Len_g40516 GAE3 UDP-D-glucuronic acid 4-epimerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012248 GAE1 UDP-D-glucuronic acid 4-epimerase & original... 0.03 OrthoFinder output from all 47 species
Zm00001e036291_P001 GAE1, Zm00001e036291 UDP-D-glucuronic acid 4-epimerase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003919 FMN adenylyltransferase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 98 346
No external refs found!