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  5. Sacu_v1.1_s0101.g019770

Sacu_v1.1_s0101.g019770


Description : not classified & original description: CDS=232-954


Gene families : OG0005008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005008_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0101.g019770
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Ala_g05759 EMB2759 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03299 EMB2759 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00724 EMB2759 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g03960.1 EMB2759 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g32278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04526 EMB2759 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!