Sacu_v1.1_s0100.g019620


Description : not classified & original description: CDS=1-3645


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0100.g019620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00127550 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT3G61300 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT4G11610 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.04 OrthoFinder output from all 47 species
AT5G06850 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.06 OrthoFinder output from all 47 species
AT5G48060 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.03 OrthoFinder output from all 47 species
Ala_g11837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07946 QKY not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01059.t1 Aspi01Gene01059 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000463 No alias not classified & original description: CDS=1-3471 0.04 OrthoFinder output from all 47 species
Cba_g78227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G076300.1 Ceric.19G076300 not classified & original description: pacid=50576019... 0.03 OrthoFinder output from all 47 species
Ceric.22G069500.1 Ceric.22G069500 not classified & original description: pacid=50615182... 0.03 OrthoFinder output from all 47 species
Dcu_g04914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01029967001 No alias FT-interacting protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_20033 No alias no description available(sp|q9m2r0|ftip3_arath : 959.0) 0.06 OrthoFinder output from all 47 species
Gb_33902 No alias no description available(sp|q60ew9|ftip7_orysj : 1244.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g40480.1 QKY, LOC_Os01g40480 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g44490.1 LOC_Os02g44490 no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.03 OrthoFinder output from all 47 species
LOC_Os02g57090.1 LOC_Os02g57090 no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g44890.1 LOC_Os03g44890 no description available(sp|q9m2r0|ftip3_arath : 732.0) 0.03 OrthoFinder output from all 47 species
LOC_Os05g30750.5 LOC_Os05g30750 no description available(sp|q60ew9|ftip7_orysj : 1527.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g35480.1 LOC_Os05g35480 no description available(sp|q9m2r0|ftip3_arath : 998.0) 0.05 OrthoFinder output from all 47 species
LOC_Os07g07070.1 LOC_Os07g07070 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g30020.1 LOC_Os07g30020 no description available(sp|q9m2r0|ftip3_arath : 1066.0) 0.04 OrthoFinder output from all 47 species
Len_g02418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436836g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 197.0) 0.03 OrthoFinder output from all 47 species
MA_5279581g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 296.0) 0.04 OrthoFinder output from all 47 species
MA_7640327g0010 QKY Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_94243g0010 No alias no description available(sp|q9m2r0|ftip3_arath : 850.0) 0.02 OrthoFinder output from all 47 species
Mp6g00440.1 No alias no description available(sp|q60ew9|ftip7_orysj : 926.0) 0.03 OrthoFinder output from all 47 species
Msp_g13144 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g09020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010812 No alias not classified & original description: CDS=1-3075 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018526 No alias not classified & original description: CDS=1-3183 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025914 No alias not classified & original description: CDS=1-2928 0.06 OrthoFinder output from all 47 species
Solyc01g006620.3.1 Solyc01g006620 no description available(sp|q9m2r0|ftip3_arath : 1132.0) 0.04 OrthoFinder output from all 47 species
Solyc01g086720.3.1 Solyc01g086720 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc01g094410.3.1 Solyc01g094410 no description available(sp|q9m2r0|ftip3_arath : 1084.0) 0.03 OrthoFinder output from all 47 species
Solyc09g064230.3.1 Solyc09g064230 no description available(sp|q9m2r0|ftip3_arath : 978.0) 0.04 OrthoFinder output from all 47 species
Solyc10g080420.3.1 Solyc10g080420 no description available(sp|q9m2r0|ftip3_arath : 846.0) 0.03 OrthoFinder output from all 47 species
Spa_g02263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g54189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016221_P001 Zm00001e016221 no description available(sp|q9m2r0|ftip3_arath : 957.0) 0.07 OrthoFinder output from all 47 species
Zm00001e023184_P001 Zm00001e023184 no description available(sp|q9m2r0|ftip3_arath : 827.0) 0.04 OrthoFinder output from all 47 species
Zm00001e024540_P001 Zm00001e024540 no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.03 OrthoFinder output from all 47 species
Zm00001e027004_P001 Zm00001e027004 no description available(sp|q9m2r0|ftip3_arath : 963.0) 0.03 OrthoFinder output from all 47 species
Zm00001e030514_P001 Zm00001e030514 no description available(sp|q60ew9|ftip7_orysj : 1482.0) 0.03 OrthoFinder output from all 47 species
Zm00001e037594_P001 Zm00001e037594 no description available(sp|q60ew9|ftip7_orysj : 1495.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 1048 1214
IPR000008 C2_dom 389 503
IPR000008 C2_dom 577 697
IPR000008 C2_dom 775 897
IPR000008 C2_dom 13 69
No external refs found!