1. Home
  2. Species
  3. Equisetum hyemale
  4. Sequence
  5. Ehy_g07090

Ehy_g07090 (GC5)


Aliases : GC5

Description : Golgin-type membrane tethering protein *(GC5/TMF) & original description: none


Gene families : OG0003150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003150_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g07090

Target Alias Description ECC score Gene Family Method Actions
Ala_g08575 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Aob_g16762 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.02 OrthoFinder output from all 47 species
Ceric.20G030700.1 GC5, Ceric.20G030700 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.16 No alias Golgin candidate 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre03.g187000 GC5 Golgin candidate 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre09.g400812 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_05776 GC5 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_9882g0010 GC5 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g06100.1 GC5 golgin (GC5/TMF) 0.03 OrthoFinder output from all 47 species
Ore_g05368 GC5 Golgin-type membrane tethering protein *(GC5/TMF) &... 0.03 OrthoFinder output from all 47 species
Solyc06g066610.4.1 GC5, Solyc06g066610 golgin (GC5/TMF) 0.02 OrthoFinder output from all 47 species
Zm00001e026510_P001 GC5, Zm00001e026510 Golgin candidate 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR022092 TMF_DNA-bd 382 450
IPR022091 TMF_TATA-bd 797 903
No external refs found!