Sacu_v1.1_s0098.g019484

Description : E3 ubiquitin ligase *(DRR1) & original description: CDS=1-1233

Gene families : OG0001028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001028_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0098.g019484
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010547	No alias	E3 ubiquitin ligase *(DRR1) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g01155	No alias	E3 ubiquitin ligase *(DRR1) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01905	No alias	E3 ubiquitin ligase *(DRR1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18426.t1	Aspi01Gene18426	E3 ubiquitin ligase *(DRR1) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g24624	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020934.54	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	358	399

External Links

No external refs found!