1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0097.g019431

Sacu_v1.1_s0097.g019431


Description : deubiquitinase *(OTU3-4) & original description: CDS=607-1785


Gene families : OG0001848 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001848_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0097.g019431
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0003.g007829 No alias deubiquitinase *(OTU3-4) & original description: CDS=67-1170 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058444 No alias deubiquitinase *(OTU3-4) & original description: CDS=76-783 0.03 OrthoFinder output from all 47 species
Len_g29742 No alias deubiquitinase *(OTU3-4) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005047 signal recognition particle binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005785 signal recognition particle receptor complex IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR003323 OTU_dom 253 378
No external refs found!