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  5. Sacu_v1.1_s0096.g019407

Sacu_v1.1_s0096.g019407


Description : deadenylase component *(CCR4) of mRNA deadenylation CCR4-NOT complex & original description: CDS=1-1779


Gene families : OG0002208 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002208_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0096.g019407

Target Alias Description ECC score Gene Family Method Actions
Aob_g26680 No alias deadenylase component *(CCR4) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species
Len_g31358 No alias deadenylase component *(CCR4) of mRNA deadenylation... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR031615 Zfn-C6H2 71 109
IPR005135 Endo/exonuclease/phosphatase 249 577
No external refs found!