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  5. Sacu_v1.1_s0096.g019400

Sacu_v1.1_s0096.g019400


Description : not classified & original description: CDS=1-1278


Gene families : OG0003312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0096.g019400

Target Alias Description ECC score Gene Family Method Actions
Aev_g01132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61433.t1 Aspi01Gene61433 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z075300.1 Ceric.1Z075300 not classified & original description: pacid=50576772... 0.03 OrthoFinder output from all 47 species
Dcu_g02881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!