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  5. Sacu_v1.1_s0096.g019354

Sacu_v1.1_s0096.g019354


Description : not classified & original description: CDS=419-1351


Gene families : OG0000459 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000459_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0096.g019354

Target Alias Description ECC score Gene Family Method Actions
Aob_g07156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0484.g073375 No alias light chain of Dynein microtubule-based motor protein... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000319.27 No alias No description available 0.01 OrthoFinder output from all 47 species
Nbi_g14305 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species
Sam_g13042 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13043 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g063180.3.1 Solyc07g063180 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g16203 No alias light chain of Dynein microtubule-based motor protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007017 microtubule-based process IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001372 Dynein_light_chain_typ-1/2 217 301
No external refs found!