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  5. Sacu_v1.1_s0096.g019327

Sacu_v1.1_s0096.g019327


Description : not classified & original description: CDS=54-425


Gene families : OG0000407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0096.g019327

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00066810 evm_27.TU.AmTr_v1... Non-specific lipid-transfer protein OS=Malus domestica 0.03 OrthoFinder output from all 47 species
AT2G18370 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT3G08770 LTP6 lipid transfer protein 6 0.03 OrthoFinder output from all 47 species
AT5G44265 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Aev_g47330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05010.t1 LTP4, Aspi01Gene05010 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08095.t1 Aspi01Gene08095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08117.t1 LTP4, Aspi01Gene08117 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08118.t1 LTP4, Aspi01Gene08118 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G006400.1 Ceric.02G006400 not classified & original description: pacid=50584115... 0.04 OrthoFinder output from all 47 species
Ceric.02G024300.1 Ceric.02G024300 not classified & original description: pacid=50585057... 0.03 OrthoFinder output from all 47 species
Ceric.13G068200.1 Ceric.13G068200 not classified & original description: pacid=50636227... 0.07 OrthoFinder output from all 47 species
Ehy_g11655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24012 LTP12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24013 LP2, cdf3, LTP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24014 LP2, cdf3, LTP2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29058 LTP1, ATLTP1, LP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006001001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01021772001 No alias Non-specific lipid-transfer protein C,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027088001 No alias Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia 0.03 OrthoFinder output from all 47 species
GSVIVT01030190001 No alias Non-specific lipid-transfer protein P5 OS=Vitis sp. 0.03 OrthoFinder output from all 47 species
Gb_02342 LTP3 Non-specific lipid-transfer protein OS=Pinus taeda... 0.02 OrthoFinder output from all 47 species
Gb_20253 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_20255 No alias Non-specific lipid-transfer protein OS=Gerbera hybrida... 0.02 OrthoFinder output from all 47 species
Gb_25561 LTP3 Non-specific lipid-transfer protein 4 (Fragment) OS=Lens... 0.04 OrthoFinder output from all 47 species
LOC_Os01g12020.1 LOC_Os01g12020 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g60740.1 LOC_Os01g60740 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g59380.1 LOC_Os03g59380 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g34840.1 LOC_Os06g34840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g27940.1 LOC_Os07g27940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g02350.1 LOC_Os11g02350 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os12g02300.1 LOC_Os12g02300 Non-specific lipid-transfer protein 3 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os12g02330.2 LTP3, LOC_Os12g02330 Non-specific lipid-transfer protein 1 OS=Morus nigra... 0.03 OrthoFinder output from all 47 species
Lfl_g00161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10239006g0010 LTP4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_1056334g0010 LTP4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_107601g0010 LTP4 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_307546g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_422961g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_50251g0010 No alias Non-specific lipid-transfer protein OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
MA_6905336g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g22339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019322 No alias not classified & original description: CDS=195-662 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023749 LTP1, ATLTP1, LP1 not classified & original description: CDS=116-469 0.04 OrthoFinder output from all 47 species
Solyc03g026090.4.1 Solyc03g026090 Putative non-specific lipid-transfer protein 14... 0.03 OrthoFinder output from all 47 species
Solyc06g059790.4.1 Solyc06g059790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g067550.1.1 Solyc08g067550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g008500.3.1 Solyc09g008500 Non-specific lipid-transfer protein 2 OS=Solanum... 0.04 OrthoFinder output from all 47 species
Solyc10g012120.1.1 Solyc10g012120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc10g012130.1.1 Solyc10g012130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc10g075110.2.1 LTP1, ATLTP1,... Non-specific lipid-transfer protein 1 OS=Solanum... 0.02 OrthoFinder output from all 47 species
Solyc10g075118.1.1 Solyc10g075118 Non-specific lipid-transfer protein 2 OS=Nicotiana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 19 110
No external refs found!