Sacu_v1.1_s0095.g019284


Description : not classified & original description: CDS=34-390


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0095.g019284
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT1G03510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003314 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g011924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036683 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083315 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g088386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111309 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12767 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21347 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13090.t1 Aspi01Gene13090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13883.t1 Aspi01Gene13883 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34804.t1 Aspi01Gene34804 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56737.t1 Aspi01Gene56737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.04 OrthoFinder output from all 47 species
Azfi_s0020.g015372 OTP86 not classified & original description: CDS=1-2592 0.05 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033567 EMB2758 not classified & original description: CDS=1-2352 0.04 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.04 OrthoFinder output from all 47 species
Azfi_s0233.g059378 No alias not classified & original description: CDS=1-1827 0.04 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07743 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19795 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77978 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G115200.1 Ceric.01G115200 not classified & original description: pacid=50591005... 0.03 OrthoFinder output from all 47 species
Ceric.04G038000.1 Ceric.04G038000 not classified & original description: pacid=50632532... 0.04 OrthoFinder output from all 47 species
Ceric.04G078900.1 Ceric.04G078900 not classified & original description: pacid=50631863... 0.03 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.04 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.03 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.07 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.05 OrthoFinder output from all 47 species
Ceric.09G062300.1 Ceric.09G062300 not classified & original description: pacid=50587557... 0.03 OrthoFinder output from all 47 species
Ceric.12G018600.1 Ceric.12G018600 not classified & original description: pacid=50602205... 0.03 OrthoFinder output from all 47 species
Ceric.13G076400.1 Ceric.13G076400 not classified & original description: pacid=50635248... 0.04 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.04 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.04 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.05 OrthoFinder output from all 47 species
Ceric.23G032000.1 Ceric.23G032000 not classified & original description: pacid=50611416... 0.03 OrthoFinder output from all 47 species
Ceric.24G026700.1 Ceric.24G026700 not classified & original description: pacid=50628649... 0.04 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.03 OrthoFinder output from all 47 species
Ceric.26G013500.1 Ceric.26G013500 not classified & original description: pacid=50600195... 0.05 OrthoFinder output from all 47 species
Ceric.29G051500.1 Ceric.29G051500 not classified & original description: pacid=50625217... 0.05 OrthoFinder output from all 47 species
Ceric.30G025700.1 CRR22, Ceric.30G025700 not classified & original description: pacid=50609433... 0.04 OrthoFinder output from all 47 species
Ceric.30G033800.1 Ceric.30G033800 not classified & original description: pacid=50608836... 0.05 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.04 OrthoFinder output from all 47 species
Ceric.37G010300.1 Ceric.37G010300 not classified & original description: pacid=50616652... 0.04 OrthoFinder output from all 47 species
Ceric.37G034100.1 Ceric.37G034100 not classified & original description: pacid=50616957... 0.04 OrthoFinder output from all 47 species
Ceric.38G015500.1 Ceric.38G015500 not classified & original description: pacid=50579581... 0.03 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.04 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.04 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47670 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g45410.1 LOC_Os11g45410 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g16246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g51033 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07429 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39239 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429069g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.05 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_8499g0030 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Msp_g04764 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28331 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33669 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g33835 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44143 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09062 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10335 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18089 MEF19 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13748 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.03 OrthoFinder output from all 47 species
Spa_g06411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55591 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06074 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g06116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22900 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44315 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 34 59
IPR002885 Pentatricopeptide_repeat 65 89
IPR002885 Pentatricopeptide_repeat 2 23
No external refs found!